Sunday |
2:00 pm - 9:00 pm | Arrival and Check-in |
6:00 pm | Dinner |
7:30 pm - 7:40 pm | Welcome / Introductory Comments by GRC Site Staff |
7:40 pm - 9:30 pm | Biodiversity and Phylogenomics |
| Discussion Leader: Wes Warren (Washington University, USA) |
7:40 pm - 7:50 pm | Opening Remarks |
7:50 pm - 8:00 pm | Introduction by Discussion Leader |
8:00 pm - 8:30 pm | Casey Dunn (Brown University, USA) "What Can We Learn About Animal Evolution from Phylogenomics?" |
8:30 pm - 8:40 pm | Discussion |
8:40 pm - 9:10 pm | Davide Pisani (University of Bristol, United Kingdom) "Estimating the Reliability of Clades in the Early
Evolution of Animals Using Large Scale Data Sets" |
9:10 pm - 9:20 pm | Discussion |
9:20 pm - 9:30 pm | General Discussion: Biodiversity and Phylogenomics |
Monday |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | Networks: From
Genes to Ecosystems |
| Discussion Leader: Christian Landry (Université Laval, Canada) |
9:00 am - 9:10 am | Introduction by Discussion Leader |
9:10 am - 9:40 am | Patricia Wittkopp (University of Michigan, USA) "The Impact of Mutation and Selection on Variation
in Gene Regulatory Networks" |
9:40 am - 9:50 am | Discussion |
9:50 am - 10:20 am | Karoline Faust (KU Leuven - VIB, Belgium) "Network Inference Meets Metagenomics: Challenges, Tools and Applications" |
10:20 am - 10:30 am | Discussion |
10:30 am - 11:00 am | Coffee Break |
11:00 am - 11:30 am | Cedric Feschotte (University of Utah School of Medicine, USA) "Endogenous Retroviruses Facilitate the Evolution of a Gene Regulatory Network Underlying the Mammalian Immune Response" |
11:30 am - 11:40 am | Discussion |
11:40 am - 12:10 pm | Alvaro Sanchez (Harvard University, USA) "Evolution of a Microbial Ecological Network" |
12:10 pm - 12:20 pm | Discussion |
12:20 pm - 12:30 pm | General Discussion: Networks in Ecological and Evolutionary Genomics |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | Applications of Ecological and Evolutionary Genomics |
| Discussion Leader: Courtney Babbitt (University of Massachusetts Amherst, USA) |
7:30 pm - 7:35 pm | Introduction by Discussion Leader |
7:35 pm - 8:05 pm | Joseph Shaw (Indiana University, USA) "Genomes as Indicators of Environmental Pollution" |
8:05 pm - 8:10 pm | Discussion |
8:10 pm - 8:40 pm | Sherry Flint-Garcia (US Department of Agriculture, Agricultural Research Service, USA) "Applying the Maize Domestication Model to Utilize Maize Diversity" |
8:40 pm - 8:45 pm | Discussion |
8:45 pm - 9:15 pm | Elodie Ghedin (New York University, USA) "Swarm Transmission, Adaptation, and Evolutionary Dynamics of Influenza A" |
9:15 pm - 9:20 pm | Discussion |
9:20 pm - 9:30 pm | General Discussion: Applications of Ecological and Evolutionary Genomics |
Tuesday |
7:30 am - 8:30 am | Breakfast |
8:30 am | Group Photo |
9:00 am - 12:30 pm | Advances in Genomic Approaches to Non-Model Organisms |
| Discussion Leader: Sonal Singhal (Columbia University, USA) |
9:00 am - 9:10 am | Introduction by Discussion Leader |
9:10 am - 9:40 am | Holly Bik (University of Birmingham, United Kingdom) "Using -Omics Approaches to Uncover Biodiversity and Ecological Roles of Meiofaunal Metazoa" |
9:40 am - 9:50 am | Discussion |
9:50 am - 10:20 am | Steven Salzberg (Johns Hopkins University, USA) "Challenges and Solutions for Analyses of Complex RNA and DNA Sequence Data" |
10:20 am - 10:30 am | Discussion |
10:30 am - 11:00 am | Coffee Break |
11:00 am - 11:30 am | Wes Warren (Washington University, USA) "Lessons Learned from Genome
Assembly and Analysis" |
11:30 am - 11:40 am | Discussion |
11:40 am - 12:10 pm | Beth Shapiro (University of California, Santa Cruz, USA) "A Paleogenomic Perspective on Evolution and Gene Function:
New Insights from Ancient DNA" |
12:10 pm - 12:20 pm | Discussion |
12:20 pm - 12:30 pm | General Discussion: Advances in Genomic Approaches for Non-Model Organisms |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | Behavioral Ecology
Meets Genomics |
| Discussion Leader: Sandra Rehan (University of New Hampshire, USA) |
7:30 pm - 7:35 pm | Introduction by Discussion Leader |
7:35 pm - 8:05 pm | Laurent Keller (University of Lausanne, Switzerland) "Supergenes and Socialites in Ants" |
8:05 pm - 8:10 pm | Discussion |
8:10 pm - 8:40 pm | Amy Toth (Iowa State University, USA) "Genomic Explorations into the Evolution of Social Behavior Using Polistes Paper Wasps" |
8:40 pm - 8:45 pm | Discussion |
8:45 pm - 9:15 pm | Todd Schlenke (Reed College, USA) "Genomic Approaches to Understanding Behavioral Immune Defenses in Fruit Flies" |
9:15 pm - 9:20 pm | Discussion |
9:20 pm - 9:30 pm | General Discussion: Behavioral Ecological Genomics |
Wednesday |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | Young Investigator Presentations: Advances in Ecological and Evolutionary Genomics |
| Discussion Leader: James Marden (Pennsylvania State University, USA) |
9:00 am - 9:10 am | Introduction by Discussion Leader |
9:10 am - 9:30 am | Courtney Babbitt (University of Massachusetts Amherst, USA) "Positive Selection in Regulatory Regions Is Correlated with Important Phenotypic Changes in Human Evolution" |
9:30 am - 9:35 am | Discussion |
9:35 am - 9:55 am | Nina Overgaard Therkildsen (Stanford University, USA) "Tracking Genomic Changes During Rapid Life History Evolution in a Non-Model Species with Population-Level Whole Genome Sequencing" |
9:55 am - 10:00 am | Discussion |
10:00 am - 10:20 am | Timothy Sackton (Harvard University, USA) "The Genomic Basis of Convergent Loss of Flight in Birds" |
10:20 am - 10:25 am | Discussion |
10:25 am - 10:55 am | Coffee Break |
10:55 am - 11:15 am | Vicencio Oostra (University College London, United Kingdom) "The Flexible Genome: Uncovering the Regulatory Basis of Phenotypic Plasticity" |
11:15 am - 11:20 am | Discussion |
11:20 am - 11:40 am | Kevin Forsberg (Fred Hutchinson Cancer Research Center, USA) "Antibiotic Resistance in Natural Soil Communities" |
11:40 am - 11:45 am | Discussion |
11:45 am - 12:05 pm | Michelle Afkhami (University of Toronto, Canada) "Multiple Mutualist Effects: Combining Transcriptomics and Experimental Ecology to Determine the Genomic Basis of Synergistic Interactions Between Mycorrhizal Fungi, Rhizobia, and Legumes" |
12:05 pm - 12:10 pm | Discussion |
12:10 pm - 12:30 pm | General Discussion: Advances in the EEG Field |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session |
6:00 pm | Dinner |
7:00 pm - 7:30 pm | Business Meeting |
| Nominations for the Next Vice Chair; Fill in Conference Evaluation Forms; Discuss Future Site and Scheduling Preferences; Election of the Next Vice Chair |
7:30 pm - 9:30 pm | Population
Genomics, Adaptation and Speciation |
| Discussion Leader: David Rand (Brown University, USA) |
7:30 pm - 7:35 pm | Introduction by Discussion Leader |
7:35 pm - 8:05 pm | Andrew Clark (Cornell University, USA) "Invasion and Fixation of a Mutagenic Chain
Reaction" |
8:05 pm - 8:10 pm | Discussion |
8:10 pm - 8:40 pm | Asher Cutter (University of Toronto, Canada) "Bridging the Micro to Macro Divide in Genome Evolution of Caenorhabditis Nematodes" |
8:40 pm - 8:45 pm | Discussion |
8:45 pm - 9:15 pm | Josephine Pemberton (University of Edinburgh, United Kingdom) "Genomic Analysis of Complex Traits in the Wild" |
9:15 pm - 9:20 pm | Discussion |
9:20 pm - 9:30 pm | General Discussion |
Thursday |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | Symbiosis and Interacting Species |
| Discussion Leader: Vincent Martinson (University of Rochester, USA) |
9:00 am - 9:30 am | Felicity Jones (Friedrich Miescher Laboratory of the Max Planck Society, Germany) and Michael Pfrender (University of Notre Dame, USA) "Future Directions and Challenges in Ecological and Evolutionary Genomics" |
9:30 am - 9:40 am | Discussion |
9:40 am - 9:50 am | Introduction by Discussion Leader |
9:50 am - 10:20 am | Angela Douglas (Cornell University, USA) "Functional Consequences of Genomic Decay in Bacterial Symbionts of Insects" |
10:20 am - 10:30 am | Discussion |
10:30 am - 11:00 am | Coffee Break |
11:00 am - 11:30 am | Takema Fukatsu (National Institute of Advanced Industrial Science and Technology, Japan) "Symbiosis Underpinning Ecological Adaptations in Insects" |
11:30 am - 11:40 am | Discussion |
11:40 am - 12:10 pm | Wayne Potts (University of Utah, USA) "Host Genetic Diversity Dramatically Retards Viral Virulence Evolution: The Genomic Basis" |
12:10 pm - 12:20 pm | Discussion |
12:20 pm - 12:30 pm | General Discussion: Symbiosis and Interacting Species |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | Community and Ecosystem Genomics |
| Discussion Leader: Anna-Liisa Laine (University of Helsinki, Finland) |
7:30 pm - 7:40 pm | Introduction by Discussion Leader |
7:40 pm - 8:10 pm | Jack Gilbert (Argonne National Laboratory, USA) "Reconstructing Genomes from Complex Microbial Assemblages to Model Metabolic Networks" |
8:10 pm - 8:15 pm | Discussion |
8:15 pm - 8:45 pm | Blake Matthews (Swiss Federal Institute of Freshwater Science and Technology, Switzerland) "Experimental Evidence for Eco-Evolutionary Feedbacks in Aquatic Ecosystems" |
8:45 pm - 8:50 pm | Discussion |
8:50 pm - 9:20 pm | Jenn Schweitzer (University of Tennessee, USA) "Eco-Evolutionary Dynamics: Linkages and Feedbacks from Genes to Ecosystems" |
9:20 pm - 9:25 pm | Discussion |
9:25 pm - 9:30 pm | Closing Remarks |
Friday |
7:30 am - 8:30 am | Breakfast |
9:00 am | Departure |