SUNDAY |
2:00 pm - 11:00 pm | Arrival and Check-in |
6:00 pm | Dinner |
7:30 pm - 7:40 pm | Welcome / Introductory Comments by GRC Site Staff |
7:40 pm - 9:30 pm | KEYNOTE SPEAKERS: FRONTIERS OF DNA & RNA RESEARCH |
| Discussion Leaders: Cynthia Burrows (University of Utah) and Jody Puglisi (Stanford University) |
7:40 pm - 8:25 pm | Jacqueline Barton (Caltech) "DNA-mediated charge transport for long range signaling" |
8:25 pm - 8:35 pm | Discussion |
8:35 pm - 9:20 pm | Ignacio Tinoco (UC Berkeley) "Codon-by-codon translation of messenger RNA" |
9:20 pm - 9:30 pm | Discussion |
MONDAY |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | MOLECULAR RECOGNITION AND PROCESSING OF DNA DAMAGE |
9:00 am - 9:05 am | Discussion Leader: Susan Wallace (University of Vermont) |
9:05 am - 9:30 am | Orlando Schärer (SUNY Stony Brook) "Mechanisms of damage recognition and dual incision in human nucleotide excision repair" |
9:30 am - 9:35 am | Discussion |
9:35 am - 10:00 am | Jim Stivers (Johns Hopkins University) "Enzymatic detection of damaged bases in DNA" |
10:00 am - 10:05 am | Discussion |
10:05 am | Coffee Break / Group Photo |
10:35 am - 11:00 am | Steve West (Cancer Center UK) "Aprataxin: a proof-reader for abortive DNA ligation events" |
11:00 am - 11:05 am | Discussion |
11:05 am - 11:30 am | Susan Wallace (University of Vermont) "Replicative polymerases meet oxidative DNA damages" |
11:30 am - 11:35 am | Discussion |
11:35 am - 12:00 pm | Tom Kunkel (NIEHS) "Evidence that DNA polymerase epsilon participates in leading strand DNA replication" |
12:00 pm - 12:05 pm | Discussion |
12:05 pm - 12:25 pm | Zucai Suo (Ohio State University)
"Mechanism of DNA lesion bypass catalyzed by a Y-family DNA polymerase" |
12:25 pm - 12:30 pm | Discussion |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session I: White |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | NUCLEOSOMES AND DNA DYNAMICS |
| Discussion Leader: Leemor Joshua-Tor (Cold Spring Harbor) |
7:30 pm - 7:55 pm | Jonathan Widom (Northwestern University) "The genomic code for nucleosome positioning" |
7:55 pm - 8:00 pm | Discussion |
8:00 pm - 8:25 pm | Geeta Narlikar (UC, San Francisco) "Mechanisms of ATP-dependent chromatin remodeling enzymes" |
8:25 pm - 8:30 pm | Discussion |
8:30 pm - 8:55 pm | Steve Kowalczykowski (UC, Davis) "Single-molecule visualization of translocation by DNA-remodeling motor proteins" |
8:55 pm - 9:00 pm | Discussion |
9:00 pm - 9:25 pm | Leemor Joshua-Tor (Cold Spring Harbor) "DNA translocation in a replicative hexameric helicase" |
9:25 pm - 9:30 pm | Discussion |
TUESDAY |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | RIBOZYMES AND RIBOSWITCHES: STRUCTURAL BASIS FOR FUNCTION |
9:00 am - 9:05 am | Discussion Leader: Adrian Ferre-d’Amare (Hutchinson Cancer Center) |
9:05 am - 9:30 am | David Lilley (University of Dundee) "Structure and mechanism of the VS ribozyme" |
9:30 am - 9:35 am | Discussion |
9:35 am - 9:45 am | Dinggeng Chai (University of Calgary)
"3D Model of a group II intron and its interaction with the intron-encoded reverse transcriptase" |
9:45 am - 9:50 am | Discussion |
9:50 am - 10:15 am | Adrian Ferre-d’Amare (Hutchinson Cancer Center) "The glmS ribozyme-riboswitch: structural analysis of a coenzyme-dependent catalytic RNA" |
10:15 am - 10:20 am | Discussion |
10:20 am | Coffee Break |
10:45 am - 10:55 am | Maumita Mandal (UC, Berkeley)
"Dynamics of conformational switching in single molecules of guanine-responsive riboswitch" |
10:55 am - 11:00 am | Discussion |
11:00 am - 11:25 am | Dan Herschlag (Stanford University)
"Demystifying RNA folding" |
11:25 am - 11:30 am | Discussion |
11:30 am - 11:55 am | Jennifer Doudna (UC, Berkeley)
"Control of mRNA recruitment to human ribosomes" |
11:55 am - 12:00 pm | Discussion |
12:00 pm - 12:10 pm | Marcia Levitus (Arizona State Univ.)
"Measuring conformational dynamics in nucleic acids: A new FCS-FRET approach" |
12:10 pm - 12:15 pm | Discussion |
12:15 pm - 12:25 pm | Peter Qin (University of Southern California)
"Mapping global structures of nucleic acids using site-directed spin labeling" |
12:25 pm - 12:30 pm | Discussion |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session I: White |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | EMERGING TECHNOLOGIES: SYNTHETIC BIOLOGY |
| Discussion Leader: Floyd Romesberg (Scripps) |
7:30 pm - 7:55 pm | Floyd Romesberg (Scripps Research Institute) "Efforts to expand the genetic alphabet" |
7:55 pm - 8:00 pm | Discussion |
8:00 pm - 8:25 pm | Christina Smolke (Caltech) "Engineering RNA devices as general tools in programming cellular function" |
8:25 pm - 8:30 pm | Discussion |
8:30 pm - 8:55 pm | Andreas Marx (University of Konstanz) "Chemical Biology of DNA Polymerases" |
8:55 pm - 9:00 pm | Discussion |
9:00 pm - 9:25 pm | Milan Stojanovic (Columbia University) "DNA computing and robotics: Science, fun, and practical applications" |
9:25 pm - 9:30 pm | Discussion |
WEDNESDAY |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | THE RIBOSOME |
9:00 am - 9:05 am | Discussion Leader: Jamie Cate (UC, Berkeley) |
9:05 am - 9:30 am | Jamie Cate (UC, Berkeley) "Structural basis for antibiotic inhibition of the bacterial ribosome" |
9:30 am - 9:35 am | Discussion |
9:35 am - 10:00 am | Venki Ramakrishnan (Cambridge University) "Structures of functional complexes of the 70S ribosome" |
10:00 am - 10:05 am | Discussion |
10:05 am - 10:30 am | Jamie Williamson (Scripps) "Assembly of the 30S ribosome in vitro and in cells" |
10:30 am - 10:35 am | Discussion |
10:35 am | Coffee Break |
11:00 am - 11:25 am | Scott Strobel (Yale University)
"Enzymology of the peptidyl transferase reaction" |
11:25 am - 11:30 am | Discussion |
11:30 am - 11:55 am | Wolfgang Wintermeyer (University of Witten-Herdecke)
"Signal recognition particle recruitment and membrane targeting of translating ribosomes in E. coli" |
11:55 am - 12:00 pm | Discussion |
12:00 pm - 12:25 pm | Marty Fedor (Scripps Research Institute)
"Architectural contributions to catalysis by the hairpin ribozyme" |
12:25 pm - 12:30 pm | Discussion |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session II: Gray |
6:00 pm | Dinner |
7:00 pm - 7:30 pm | Business Meeting |
| (Nominations for the next Vice Chair; Fill out Conference Evaluation Forms; Discuss future Site & Scheduling preferences; Election of the next Vice Chair) |
7:30 pm - 9:30 pm | RNA SPLICING MECHANISMS |
| Discussion Leader: Christine Guthrie (UC, San Francisco) |
7:30 pm - 7:55 pm | Christine Guthrie (UC, San Francisco)
"Catalytic activation of the spliceosome: Regulation of the Brr2 helicase" |
7:55 pm - 8:00 pm | Discussion |
8:00 pm - 8:25 pm | Kristen Lynch (UT Southwestern) "Mechanisms of signal-induced splicing regulation" |
8:25 pm - 8:30 pm | Discussion |
8:30 pm - 8:55 pm | Melissa Moore (Brandeis University) "Pre-mRNA splicing and RNA quality control" |
8:55 pm - 9:00 pm | Discussion |
9:00 pm - 9:25 pm | Cindy Will (Max Planck, Göttingen)
"Structural dynamics of the spliceosome" |
9:25 pm - 9:30 pm | Discussion |
THURSDAY |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | TRANSCRIPTION INITIATION AND REGULATION |
9:00 am - 9:05 am | Discussion Leader: Anna Mapp (University of Michigan) |
9:05 am - 9:30 am | Anna Mapp (University of Michigan) "Chemical control of gene activation" |
9:30 am - 9:35 am | Discussion |
9:35 am - 10:00 am | Tom Kodadek (UT Southwestern) "Understanding the roles of ubiquitin-proteasome pathway proteins In transcription: Chemical and biological approaches" |
10:00 am - 10:05 am | Discussion |
10:05 am - 10:30 am | Richard Ebright (Rutgers University) "Single-molecule analysis of transcription" |
10:30 am - 10:35 am | Discussion |
10:35 am | Coffee Break |
11:05 am - 11:30 am | Guillermo Calero (Stanford University) "Structural studies of RNA polymerase II complexes" |
11:30 am - 11:35 am | Discussion |
11:35 am - 11:45 am | Bogdan Olenyuk (University of Arizona)
"Regulation of gene expression through disruption of transcription factor-coactivator interactions" |
11:45 am - 11:50 am | Discussion |
11:50 am - 12:00 pm | Peter Carr (MIT)
"Whole genome engineering and the construction of new genetic codes" |
12:00 pm - 12:05 pm | Discussion |
12:05 pm - 12:15 pm | Katherine Berry (UC, Berkeley)
"Investigating mRNA recruitment by the human ribosome using fluorescence spectroscopy" |
12:15 pm - 12:20 pm | Discussion |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session II: Gray |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | RNA INTERFERENCE: PATHWAYS TO GENE FUNCTION |
7:30 pm - 7:35 pm | Discussion Leader: Peter Sarnow (Stanford University) |
7:35 pm - 8:00 pm | Peter Sarnow (Stanford University) "Subversion of a liver-specific microRNA by hepatitis C virus" |
8:00 pm - 8:05 pm | Discussion |
8:05 pm - 8:30 pm | Dinshaw Patel (Sloan-Kettering) "Structural biology of RNA silencing" |
8:30 pm - 8:35 pm | Discussion |
8:35 pm - 9:00 pm | Tim Nilsen (Case Western Reserve) "Mechanisms of microRNA-mediated gene regulation in animal cells" |
9:00 pm - 9:05 pm | Discussion |
9:05 pm - 9:20 pm | Feng Guo (UCLA)
"Heme is involved in microRNA processing" |
9:20 pm - 9:25 pm | Discussion |
FRIDAY |
7:30 am - 8:30 am | Breakfast |
9:00 am | Departure |