SUNDAY |
2:00 pm - 11:00 pm | Arrival and Check-in |
6:00 pm | Dinner |
7:30 pm - 7:45 pm | Welcome / Introductory Comments by GRC Site Staff |
7:45 pm - 9:30 pm | THE TRANSCRIPTION CONNECTION |
| Discussion Leader: Juan Valcárcel (Center for Genomic Regulation, Barcelona) |
7:45 pm - 8:05 pm | David Bentley (University of Colorado Health Sciences Center)
"Co-transcriptional Recruitment of Pre-mRNA Processing Factors: the Rules of Engagement" |
8:05 pm - 8:15 pm | Discussion |
8:15 pm - 8:35 pm | Thomas Gingeras (Affymetrix)
"Lesson Learned from Pervasive Transcription across the Genome: Possible Reasons and Mechanisms" |
8:35 pm - 8:45 pm | Discussion |
8:45 pm - 9:00 pm | Tracy Johnson (University of California, San Diego)
"Histone Acetylation by the Transcriptional Co-activator Gcn5 Plays a Novel Role in Co-transcriptional Spliceosome Assembly" |
9:00 pm - 9:05 pm | Discussion |
9:05 pm - 9:20 pm | Tien-Hsien Chang (Ohio State University)
"Modes of Bypassing Sub2p Suggest a Novel Link between Transcription and Splicing in Yeast" |
9:20 pm - 9:25 pm | Discussion |
MONDAY |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | GENOMICS, RNOMICS, AND EVOLUTION |
| Discussion Leader: Mariano Garcia-Blanco (Duke University) |
9:00 am - 9:20 am | Manuel Ares (University of California, Santa Cruz)
"Extracting Concrete Information about Splicing Regulation from Genome-level Data" |
9:20 am - 9:30 am | Discussion |
9:30 am - 9:50 am | Gil Ast (Tel Aviv University)
"The One Million Alus' March to Human Transcriptomic Diversity" |
9:50 am - 10:00 am | Discussion |
10:00 am | Coffee Break |
10:30 am - 10:50 am | Steven Brenner (University of California, Berkeley)
"Ultraconserved Nonsense: Regulation of SR Genes by Alternative Splicing" |
10:50 am - 11:00 am | Discussion |
11:00 am - 11:20 am | Chris Burge (MIT)
"Global Patterns in Tissue-Specific Alternative Splicing" |
11:20 am - 11:30 am | Discussion |
11:30 am - 11:50 am | Chris Lee (UCLA)
"Alternative Splicing and the Evolution of Exon Duplications in Insect DSCAM Genes" |
11:50 am - 12:00 pm | Discussion |
12:00 pm - 12:20 pm | John Castle (Rosetta Inpharmatics)
"Genome-wide, Systematic Study of Alternative Splicing Regulation in Human Tissues" |
12:20 pm - 12:30 pm | Discussion |
12:30 pm | Group Photo / Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session I |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | TRANSLATIONAL CONTROL |
| Discussion Leader: Anita Hopper (Ohio State University, Columbus) |
7:30 pm - 7:50 pm | Frédéric Allain (ETH, Zürich)
"NMR of Protein-RNA Complexes: Insight into Mechanisms of Translation and Splicing Regulation" |
7:50 pm - 8:00 pm | Discussion |
8:00 pm - 8:20 pm | Fátima Gebauer (Center for Genomic Regulation, Barcelona)
"Translational Control of X Chromosome Dosage Compensation" |
8:20 pm - 8:30 pm | Discussion |
8:30 pm - 8:50 pm | Joel Richter (University of Massachusetts, Worcester)
"Translational Control of p53 mRNA Regulates Human Cellular Senescence" |
8:50 pm - 9:00 pm | Discussion |
9:00 pm - 9:20 pm | Peter Sarnow (Stanford University School of Medicine)
"Subversion of a Liver-Specific MicroRNA by Hepatitis C Virus" |
9:20 pm - 9:30 pm | Discussion |
TUESDAY |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | RNA SPLICING AND DISEASE |
| Discussion Leader: Kristen Lynch (University of Texas Southwestern Medical Center) |
9:00 am - 9:20 am | Robert Darnell (Rockefeller University)
"Predicted and Observed RNA Regulatory Maps in the Brain" |
9:20 am - 9:30 am | Discussion |
9:30 am - 9:50 am | Xiang-Dong Fu (University of California, San Diego)
"Digital Analysis of Gene Expression and Alternative Splicing by High-Throughput Sequencing" |
9:50 am - 10:00 am | Discussion |
10:00 am | Coffee Break |
10:30 am - 10:50 am | Mariano Garcia-Blanco (Duke University)
"RNA-Protein Interactions in Illness and in Health" |
10:50 am - 11:00 am | Discussion |
11:00 am - 11:20 am | Ryszard Kole (University of North Carolina, Chapel Hill)
"Therapeutic Effects of Splice-Switching Oligonucleotides in Mouse Disease Models" |
11:20 am - 11:30 am | Discussion |
11:30 am - 11:50 am | Masatoshi Hagiwara (Tokyo Medical & Dental University)
"Mechanism of Herpesvirus-Induced Alternative Splicing of Cellular Genes" |
11:50 am - 12:00 pm | Discussion |
12:00 pm - 12:20 pm | Thomas Cooper (Baylor College of Medicine)
"The Pathogenic Mechanisms of an RNA Gain-of-Function in Myotonic Dystrophy" |
12:20 pm - 12:30 pm | Discussion |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session II |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | SPLICING REGULATION |
| Discussion Leader: Susan Wente (Vanderbilt University) |
7:30 pm - 7:50 pm | Kristen Lynch (University of Texas Southwestern Medical Center)
"Context-Dependent Differences in Mechanisms of Signal-Induced Exon Repression" |
7:50 pm - 8:00 pm | Discussion |
8:00 pm - 8:20 pm | Juan Valcárcel (Center for Genomic Regulation, Barcelona)
"Cellular Programs that Regulate Alternative Splicing" |
8:20 pm - 8:30 pm | Discussion |
8:30 pm - 8:50 pm | Benjamin Blencowe (University of Toronto)
"Global Regulation of Alternative Splicing in the Mammalian Nervous System" |
8:50 pm - 9:00 pm | Discussion |
9:00 pm - 9:20 pm | Andrea Barta (University of Vienna)
"Analysis of Alternative Splicing in Arabidopsis: SR Proteins and their Influence on Plant Development" |
9:20 pm - 9:30 pm | Discussion |
WEDNESDAY |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | RNA TURNOVER |
| Discussion Leader: Brenda Bass (University of Utah, Salt Lake City) |
9:00 am - 9:20 am | Allan Jacobson (University of Massachusetts, Worcester)
"NMD and Termination Regulation in Yeast" |
9:20 am - 9:30 am | Discussion |
9:30 am - 9:50 am | Hervé LeHir (Center for Molecular Genetics, CNRS, Gif-Sur-Yvette)
"Structure-Function Relationship of the Exon Junction Complex: a Central Effector of mRNA Destiny" |
9:50 am - 10:00 am | Discussion |
10:00 am | Coffee Break |
10:00 am - 10:20 am | Lynne Maquat (University of Rochester)
"Nonsense-Mediated mRNA Decay in Mammals: A role for Translational Repression" |
10:50 am - 11:00 am | Discussion |
11:00 am - 11:20 am | Bill Marzluff (University of North Carolina, Chapel Hill)
"Novel Reactions in Regulation and Expression of Histone mRNAs in Mammalian Cells" |
11:20 am - 11:30 am | Discussion |
11:30 am - 11:50 am | Eric Phizicky (University of Rochester)
"Degradation of Several Hypomodified Mature tRNA Species in S. cerevisiae is Mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1" |
11:50 am - 12:00 pm | Discussion |
12:00 pm - 12:20 pm | Elmar Wahle (Martin-Luther-Universität Halle-Wittenberg)
"The Mechanism of Poly(A) Tail Length Control" |
12:20 pm - 12:30 pm | Discussion |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session III |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | SPLICING CATALYSIS AND FIDELITY |
| Discussion Leader: Manuel Ares (University of California, Santa Cruz) |
7:30 pm - 7:50 pm | Xavier Roca (Cold Spring Harbor Laboratory)
"A New Mechanism of Atypical 5'-Splice-Site Recognition by Shifted Base-Pairing to U1 snRNA" |
7:50 pm - 8:00 pm | Discussion |
8:00 pm - 8:20 pm | Charles Query (Albert Einstein College of Medicine)
"An Orthogonal System for In Vivo Investigation of U2 snRNA-Branch Site Interaction and Nucleophile Presentation During pre-mRNA Splicing" |
8:20 pm - 8:30 pm | Discussion |
8:30 pm - 8:50 pm | Jonathan Staley (University of Chicago)
"Regulating the Activity and Specificity of the Spliceosome" |
8:50 pm - 9:00 pm | Discussion |
9:00 pm - 9:20 pm | Saba Valadkhan (Case Western Reserve University)
"Mechanism of Spliceosomal Catalysis: Insights from a Minimal Splicing System" |
9:20 pm - 9:30 pm | Discussion |
THURSDAY |
7:30 am - 8:30 am | Breakfast |
9:00 am - 12:30 pm | NON-CODING RNAs |
| Discussion Leader: Andrea Barta (University of Vienna) |
9:00 am - 9:20 am | Brenda Bass (University of Utah, Salt Lake City)
"Non-Coding RNAs in C. elegans" |
9:20 am - 9:30 am | Discussion |
9:30 am - 9:50 am | Bryan Cullen (Duke University)
"Regulation of Viral and Cellular mRNAs by Virally Encoded MicroRNAs" |
9:50 am - 10:00 am | Discussion |
10:00 am | Coffee Break |
10:00 am - 10:20 am | Witold Filipowicz (Friederich Miescher Institute, Basel)
"MicroRNA Repression of Protein Synthesis in Mammalian Cells" |
10:50 am - 11:00 am | Discussion |
11:00 am - 11:20 am | Alexander Hüttenhofer (Innsbruck Medical University)
"Subtractive Hybridization and RNP Libraries: Novel Methods to Detect Functional ncRNAs" |
11:20 am - 11:30 am | Discussion |
11:30 am - 11:50 am | Amy Pasquinelli (University of California, San Diego)
"Regulation of MicroRNA Expression and Function in C. elegans" |
11:50 am - 12:00 pm | Discussion |
12:00 pm - 12:30 pm | Business Meeting |
| (Nominations for the next Vice Chair; Fill out Conference Evaluation Forms; Discuss future Site & Scheduling preferences; Election of the next Vice Chair) |
12:30 pm | Lunch |
1:30 pm - 4:00 pm | Free Time |
4:00 pm - 6:00 pm | Poster Session IV |
6:00 pm | Dinner |
7:30 pm - 9:30 pm | SPATIAL CONTROL |
| Discussion Leader: Joel Richter (University of Massachusetts, Worcester) |
7:30 pm - 7:50 pm | Anita Hopper (Ohio State University, Columbus)
"Retrograde Nuclear Accumulation of Cytoplasmic tRNA - a Conserved Response to Nutrient Deprivation" |
7:50 pm - 8:00 pm | Discussion |
8:00 pm - 8:20 pm | David Spector (Cold Spring Harbor Laboratory)
"Nuclear Retained Non-Coding RNAs" |
8:20 pm - 8:30 pm | Discussion |
8:30 pm - 8:50 pm | Susan Wente (Vanderbilt University)
"Gle1 Control of Multiple Steps in the mRNP Life Cycle" |
8:50 pm - 9:00 pm | Discussion |
9:00 pm - 9:20 pm | Gordon Carmichael (University of Connecticut Health Center)
"Alu-Element-Mediated Gene Silencing" |
9:20 pm - 9:30 pm | Discussion |
FRIDAY |
7:30 am - 8:30 am | Breakfast |
9:00 am | Depart |